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# CITATION file created with {cffr} R package
# See also: https://docs.ropensci.org/cffr/
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cff-version: 1.2.0
message: 'To cite package "MDMAPR" in publications use:'
type: software
license: GPL-3.0-only
title: 'MDMAPR: Molecular Detection Mapping and Analysis Platform'
version: 0.2.3
doi: 10.32614/CRAN.package.MDMAPR
abstract: Runs a Shiny web application that merges raw 'qPCR' fluorescence data with
  related metadata to visualize species presence/absence detection patterns and assess
  data quality. The application calculates threshold values from raw fluorescence
  data using a method based on the second derivative method, Luu-The et al (2005)
  <https://doi.org/10.2144/05382RR05>, and utilizes the ‘chipPCR’ package by Rödiger,
  Burdukiewicz, & Schierack (2015) <https://doi.org/10.1093/bioinformatics/btv205>
  to calculate Cq values. The application has the ability to connect to a custom developed
  MySQL database to populate the applications interface. The application allows users
  to interact with visualizations such as a dynamic map, amplification curves and
  standard curves, that allow for zooming and/or filtering. It also enables the generation
  of customized exportable reports based on filtered mapping data.
authors:
- family-names: Benawra
  given-names: Alka
  email: alkabenawra@rogers.com
repository: https://alkabenawra.r-universe.dev
repository-code: https://github.com/HannerLab/MDMAPR
commit: c86694736c2579ec42a6c0946a532ca0bec88723
url: https://github.com/HannerLab/MDMAPR
date-released: '2021-06-23'
contact:
- family-names: Benawra
  given-names: Alka
  email: alkabenawra@rogers.com